Friday, May 09, 2008
Calendar | Directory | Job Opportunities
The Rockefeller University Home Page
Search
Advanced Search
Science for the benefit of humanity
Resource Centers
Bio-Imaging
DNA Sequencing
Flow Cytometry
Gene Targeting
Resource Center
Genomics Resource
Center
Glasswashing Services
High Energy Physics
Instrument Shop
High Throughput
Screening
Library
Monoclonal Antibody
Proteomics Resource
Center
Spectroscopy
Stem Cell Derivation Core
Structural Biology
User Accessible
Equipment List

Home
Printer-Friendly Version
Printer-Friendly Version
Resource Centers
  Access to RU Resource Center services for non-RU Users
  Establishment of The Rockefeller University Resource Centers
  Closure of The Rockefeller University Resource Centers
  Utilization of The Rockefeller University Resource Centers
Bio-Imaging (DWB 201)
Directed by Alison North, Ph.D.
The Center provides a wide spectrum of optical microscopy equipment (confocal, DIC, DeltaVision) and extensive training in its use in the DWB 201 facility. The electron microscopy unit has traditional transmission units housed in RRB 120 and a new scanning EM in TSH C.
DNA Sequencing at The Rockefeller University
Flow Cytometry Resource Center (DWB 202)
Managed by Svetlana Mazel, Ph.D.
The FCRC provides multicolor flow cytometric analysis and sorts of single cell suspensions for many different applications. The Center offers individualized training sessions for users.
GEM Phenotyping Core (M.B. Zuckerman Research Center, Room 931)
Directed by Krista M. D. La Perle, DVM, PhD, Dipl. ACVP

The Genetically Engineered Mouse Phenotyping Core, located at Weill Medical College of Cornell University, serves investigators at Memorial Sloan-Kettering Cancer Center, The Rockefeller University and Weill Medical College, providing comprehensive baseline phenotypic profiles of genetically engineered mice, to be used by investigators unfamiliar with normal mouse anatomy, histology, physiology and age- or strain-related background lesions.

The center also aids in evaluating the entire mouse, as opposed to a specific tissue or organ system, for the purpose of identifying unanticipated phenotypic changes. A standard phenotypic profile at the center includes a complete hematology, clinical chemistry, urinalysis, survey radiographs, gross necropsy, extensive microscopic evaluation, digital images of macroscopic and microscopic lesions and an electronic report.

The facility offers the use of a cabinet x-ray for high-resolution radiographs of small laboratory animals, excised tissue and paraffin blocks. Specimens can be placed on adjustable shelves within a shielded and interlocked enclosure to obtain images magnified up to five times. Other services at the center include postmortem investigation of specimens from genetically engineered mice and pathological evaluation of other experimental animals, tissues or histology slides.

Gene Targeting Resource Center (Bronk 703)
Directed by Chingwen Yang, Ph.D.

The Gene Targeting Resource Center (GTRC) provides gene targeting and mouse embryonic stem cell technology for members of the Rockefeller University, Memorial Sloan-Kettering Cancer Center and their collaborators. Since its inception in 1997 our center has generated numerous genetically engineered mice and embryonic stem cell lines that allow the investigation of gene functions in mouse models or ES cell culture systems. We continue developing and adopting innovative approaches to better assist biomedical research in our community.

Genomics Resource Center (WRB 721)
Directed by Connie Zhao, Ph.D.

The Genomics Resource Center offers comprehensive services for gene expression analysis on several major platforms, including Affymetrix and Illumina, for global gene expression profiling, custom cDNA/oligonucleotide microarray printing and data validation using high throughput real-time polymerase chain reaction detection.

Several genotyping platforms for single nucleotide polymorphisms (SNPs) are also available, including those for whole genome association studies, whole genome and custom SNP analysis, small-scale SNP genotyping and individual SNP analysis.

The center also provides microsatellite genotyping for linkage analysis in human and animal models. The center's genome scan includes over 400 human microsatellite markers or over 100 mouse markers; marker-assisted mouse congenic strain construction; mouse genetic background checkup; and identity testing with a panel of 15 highly polymorphic markers.

Glasswashing Services (FHE A6)
This facility provides labware washing, drying, baking and autoclaving free of charge to the laboratories and assists in maintenance and use of autoclaves. Pickup and delivery of glassware is generally the same day.
High Energy Physics Instrument Shop (WRB 12)
Supervised by Vadim Sherman
Staffed by master machinists, the High Energy Physics Instrument Shop fabricates precise and unique instruments in support of the University's research needs. The staff is also available to assist in instrument design.
High Throughput Screening Resource Center (TSH 302)
Managed by Charles Karan, Ph.D.
This new facility enables researchers to screen for small molecule modulators, protein function and cellular processes. The facility has a large collection of small molecules, liquid-handling robots and spectrophotometers for high-throughput assays, a trans-illuminating/fluorescence automated microscopy system (Universal Imaging Corporation Discovery-1), cherry picker robot (Multiprobe HT), and roto-vac concentrator (Christ Beta).
Library and Scientific Information Commons
The mission of the Rita and Frits Markus Library is to support and enhance the mission of The Rockefeller University by supplying information resources to researchers and administrative offices. Drawing on its own extensive collection in the life sciences, which is maintained according to the research interests of the university, and a wide array of information resources beyond the university, the library is able to link faculty, students and staff with the information needed to advance research goals. A $10 million gift from longtime university benefactor Rita Markus in 2006 is enabling physical and technological modernizations of the facility.
Monoclonal Antibody Core Facility (DWB 208)
Managed by Frances Weis-Garcia, Ph.D.

The Monoclonal Antibody Core Facility provides researchers of Memorial Sloan-Kettering Cancer Center and The Rockefeller University with a broad spectrum of monoclonal antibody (MAb) related services. The center assists lab members in generating new MAbs and also produces, purifies, conjugates, isotypes and generates FAb fragments of MAbs.

A large selection of MAbs are in stock, ready for immediate delivery and use. Other services offered by the facility are weekly testing for mycoplasmal contamination, production of recombinant proteins from some mammalian cells and the generation of naive B cell libraries.

Proteomics Resource Center (RRB 153A)
Directed by Haiteng Deng, Ph.D.
The Protein Resource Center offers mass spectrometry (LC MS/MS and MALDI-TOF), amino acid analysis, Edman sequencing and peptide synthesis. Basic research within the center is performed to further the development of methodologies for microanalytical techniques and biopolymer synthesis.
Spectroscopy Resource Center (FLX 406)
Managed by Yufeng Wei, Ph.D.

The university maintains facilities for both nuclear magnetic resonance spectroscopy and optical spectroscopy. The Spectroscopy Center provides access to optical spectroscopic equipment for use in studies of the structure, function and dynamics of biological macromolecules. The center has different types of spectroscopic instrumentation: stopped-flow fluorescence, Fourier transform infrared (FTIR), circular dichroism (CD) and surface plasmon resonance (SPR). Educational efforts are devoted both to training frequent users and providing general background in applications of spectroscopy to structural biology and chemistry. Occasional users of the facilities may have spectra produced for them. More frequent users are encouraged and trained to operate the instruments themselves.

The center also provides access to nuclear magnetic resonance spectrometers (one 400 mHz and one 600 mHz equipped with a cryoprobe) for use in studies of the structure, function and dynamics of macromolecules, as well as spectroscopic fingerprint of peptides and small organic molecules. The center offers extensive training in basic and advanced NMR experiments and also provides access to high field spectrometers at the New York Structural Biology Center.

Stem Cell Derivation Core
The goal of the university’s derivation unit is to derive human embryonic stem cell (hESC) lines from normal as well as diseased embryos to serve the needs of the Tri-Institutional community. The unit isolates, characterizes and maintains new hESC lines. It uses classical methods and also works to develop new derivation methods that bypass the requirements of feeder influence and improve the condition of maintenance of hESC pluripotency. The facility also works to improve the ability of the newly derived lines to generate embryoid bodies and teratomas for germ layer specification assays and to develop new in vivo and in vitro assays to test the totipotency of individual lines. The stem cell derivation core, launched in 2006, is operated with private funds, allowing for derivation of and work with non-Registry hESCs.
Structural Biology Resource Center
Managed by Deena Oren, Ph.D.
The SBRC is home to state-of-the-art X-ray equipment for the determination of the three-dimensional structures of biological macromolecules. The Center houses two generators equipped with sub-freezing sample apparatus and four detectors in rooms RRB130 and RRB327. A recently acquired HighFlux HomeLab is exceptional for small samples and complex structures, providing the highest quality in-house data.