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Tri-Institutional Faculty

Head shot of Derek Tan
Derek S. Tan, Ph.D.
Program Director, Tri-Institutional Ph.D. Program in Chemical Biology
Tri-Institutional Professor
Chairman, Chemical Biology Program
Molecular Pharmacology and Chemistry Program
tand@mskcc.org

Advances in genomics have revealed myriad new potential therapeutic targets. However, existing small-molecule drugs address only a small set of approximately 200 protein targets encoded in the human genome. Efforts to expand have been thwarted by a heavy focus on a correspondingly narrow range of complementary chemical structures in drug discovery. To address this problem, Dr. Tan’s lab leverages insights from natural products in diversity-oriented synthesis and rational drug design to identify novel small-molecule ligands for a variety of targets. They leverage multidisciplinary collaborations to evaluate the molecules they synthesize to probe complex biological processes and pursue new therapeutic opportunities.

For diversity-oriented synthesis, Dr. Tan’s lab uses structural motifs found in biologically active natural products as attractive starting points for library design. At the core of these efforts is the development of new synthetic routes to provide flexible, efficient, systematic access to these structures. The resulting libraries access distinct regions of chemical space compared to conventional drug-like libraries and are screened against a wide range of targets.

In the area of rational drug design, Dr. Tan’s lab designs natural product-based sulfonyladenosine inhibitors of adenylation enzymes, a mechanistic superfamily implicated in a wide range of processes. Leveraging structural and mechanistic information about individual targets, they have developed new antibiotic lead compounds that inhibit enzymes required for bacterial virulence and semisynthetic protein inhibitors of ubiquitin-family E1 activating enzymes that have revealed dramatic active site remodeling during catalysis.


SELECTED PUBLICATIONS

Bauer, R.A. et al. Biomimetic diversity-oriented synthesis of benzannulated medium rings via ring expansion. Nat. Chem. Biol. 9, 21–29 (2013).

Kopp, F. et al. A diversity-oriented synthesis approach to macrocycles via oxidative ring expansion. Nat. Chem. Biol. 8, 358–365 (2012).

Olsen, S.K. et al. Active site remodelling accompanies thioester bond formation in the SUMO E1. Nature 463, 906–912 (2010).